IL_9GHF_095
3D structure
- PDB id
- 9GHF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CCA*UG
- Length
- 5 nucleotides
- Bulged bases
- 9GHF|1|a|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHF_095 not in the Motif Atlas
- Homologous match to IL_5J7L_276
- Geometric discrepancy: 0.0485
- The information below is about IL_5J7L_276
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
9GHF|1|a|C|994
9GHF|1|a|C|995
9GHF|1|a|A|996
*
9GHF|1|a|U|1159
9GHF|1|a|G|1160
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain i
- 50S ribosomal protein L13
- Chain p
- 50S ribosomal protein L20
- Chain q
- 50S ribosomal protein L21
- Chain y
- 50S ribosomal protein L30
Coloring options: