IL_9GHH_066
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_066 not in the Motif Atlas
- Geometric match to IL_5J7L_386
- Geometric discrepancy: 0.049
- The information below is about IL_5J7L_386
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
9GHH|1|A|G|1710
9GHH|1|A|G|1711
9GHH|1|A|A|1712
9GHH|1|A|A|1713
9GHH|1|A|C|1714
9GHH|1|A|U|1715
9GHH|1|A|C|1716
9GHH|1|A|G|1717
9GHH|1|A|G|1718
*
9GHH|1|A|C|2017
9GHH|1|A|U|2018
9GHH|1|A|G|2019
9GHH|1|A|U|2020
9GHH|1|A|C|2021
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L14
Coloring options: