IL_9GHH_108
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGGAAG*UGGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_108 not in the Motif Atlas
- Homologous match to IL_4WF9_108
- Geometric discrepancy: 0.0787
- The information below is about IL_4WF9_108
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_70411.2
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
9GHH|1|A|U|2867
9GHH|1|A|G|2868
9GHH|1|A|G|2869
9GHH|1|A|A|2870
9GHH|1|A|A|2871
9GHH|1|A|G|2872
*
9GHH|1|A|U|2885
9GHH|1|A|G|2886
9GHH|1|A|G|2887
9GHH|1|A|A|2888
9GHH|1|A|G|2889
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain Q
- 50S ribosomal protein L17
- Chain S
- 50S ribosomal protein L19
Coloring options: