IL_9GHH_112
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUCCC*GAACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GHH_112 not in the Motif Atlas
- Homologous match to IL_9DFE_113
- Geometric discrepancy: 0.1355
- The information below is about IL_9DFE_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.11
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 9
Unit IDs
9GHH|1|B|U|32
9GHH|1|B|U|33
9GHH|1|B|C|34
9GHH|1|B|C|35
9GHH|1|B|C|36
*
9GHH|1|B|G|42
9GHH|1|B|A|43
9GHH|1|B|A|44
9GHH|1|B|C|45
9GHH|1|B|A|46
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L31 type B
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- 50S ribosomal protein L5
- Chain R
- 50S ribosomal protein L18
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