IL_9GJ6_005

3D structure

PDB id

9GJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with NatA in proximal and distal position

Experimental method

ELECTRON MICROSCOPY

Resolution

3.91 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9GJ6|1|1|U|467, 9GJ6|1|1|U|687

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GJ6|1|1|A|466
9GJ6|1|1|U|467
9GJ6|1|1|U|468
9GJ6|1|1|C|469
9GJ6|1|1|A|470
9GJ6|1|1|A|471
9GJ6|1|1|C|472
*
9GJ6|1|1|G|682
9GJ6|1|1|C|683
9GJ6|1|1|G|684
9GJ6|1|1|C|685
9GJ6|1|1|A|686
9GJ6|1|1|U|687
9GJ6|1|1|U|688
9GJ6|1|1|U|689

Current chains

Chain 1

28S rRNA

Nearby chains

Chain B

N-alpha-acetyltransferase 15, NatA auxiliary subunit

Chain LE

Large ribosomal subunit protein eL6

Chain Lr

60S ribosomal protein L28