IL_9GMO_034
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GAAGGUGG*UGUUACAGC
- Length
- 17 nucleotides
- Bulged bases
- 9GMO|1|A|G|748, 9GMO|1|A|C|916
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GMO_034 not in the Motif Atlas
- Geometric match to IL_8C3A_022
- Geometric discrepancy: 0.2318
- The information below is about IL_8C3A_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07703.1
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
9GMO|1|A|G|745
9GMO|1|A|A|746
9GMO|1|A|A|747
9GMO|1|A|G|748
9GMO|1|A|G|749
9GMO|1|A|U|750
9GMO|1|A|G|751
9GMO|1|A|G|752
*
9GMO|1|A|U|911
9GMO|1|A|G|912
9GMO|1|A|U|913
9GMO|1|A|U|914
9GMO|1|A|A|915
9GMO|1|A|C|916
9GMO|1|A|A|917
9GMO|1|A|G|918
9GMO|1|A|C|919
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain M
- 60S ribosomal protein L18a
- Chain s
- 60S ribosomal protein L14
Coloring options: