IL_9GMO_105
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- (PSU)CA(A2M)AGU*AA(PSU)GAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GMO_105 not in the Motif Atlas
- Homologous match to IL_8C3A_093
- Geometric discrepancy: 0.1711
- The information below is about IL_8C3A_093
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9GMO|1|A|PSU|3715
9GMO|1|A|C|3716
9GMO|1|A|A|3717
9GMO|1|A|A2M|3718
9GMO|1|A|A|3719
9GMO|1|A|G|3720
9GMO|1|A|U|3721
*
9GMO|1|A|A|3732
9GMO|1|A|A|3733
9GMO|1|A|PSU|3734
9GMO|1|A|G|3735
9GMO|1|A|A|3736
9GMO|1|A|A|3737
9GMO|1|A|G|3738
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain c
- 60S ribosomal protein L36
- Chain i
- 60S ribosomal protein L36a
Coloring options: