IL_9GMO_146
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- (PSU)UCG*CCUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GMO_146 not in the Motif Atlas
- Homologous match to IL_8C3A_135
- Geometric discrepancy: 0.1614
- The information below is about IL_8C3A_135
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
9GMO|1|A|PSU|4972
9GMO|1|A|U|4973
9GMO|1|A|C|4974
9GMO|1|A|G|4975
*
9GMO|1|A|C|4983
9GMO|1|A|C|4984
9GMO|1|A|U|4985
9GMO|1|A|G|4986
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L3
- Chain J
- 60S ribosomal protein L17
- Chain X
- 60S ribosomal protein L31
Coloring options: