IL_9GR1_162
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CUGAG*CGAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 9GR1|1|a|G|2784
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GR1_162 not in the Motif Atlas
- Homologous match to IL_5J7L_345
- Geometric discrepancy: 0.0567
- The information below is about IL_5J7L_345
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.3
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9GR1|1|a|C|2640
9GR1|1|a|U|2641
9GR1|1|a|G|2642
9GR1|1|a|A|2643
9GR1|1|a|G|2644
*
9GR1|1|a|C|2778
9GR1|1|a|G|2779
9GR1|1|a|A|2780
9GR1|1|a|G|2781
9GR1|1|a|A|2782
9GR1|1|a|U|2783
9GR1|1|a|G|2784
9GR1|1|a|A|2785
9GR1|1|a|G|2786
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain d
- Large ribosomal subunit protein uL3
- Chain i
- 50S ribosomal protein L13
Coloring options: