IL_9GUW_031

3D structure

PDB id

9GUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-TEC (TEC in expressome position) Inactive state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

9GUW|1|A|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUW_031 not in the Motif Atlas

Homologous match to IL_4LFB_022

Geometric discrepancy: 0.1147

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20847.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

9GUW|1|A|C|569
9GUW|1|A|G|570
9GUW|1|A|U|571
9GUW|1|A|A|572
9GUW|1|A|A|573
9GUW|1|A|A|574
9GUW|1|A|G|575
*
9GUW|1|A|C|880
9GUW|1|A|G|881

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain M

30S ribosomal protein S12

Chain R

30S ribosomal protein S17