IL_9GUX_065

3D structure

PDB id

9GUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-TEC (TEC in expressome position) Inactive state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AAGAAG*CCACU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9GUX_065 not in the Motif Atlas

Homologous match to IL_5J7L_063

Geometric discrepancy: 0.157

The information below is about IL_5J7L_063

Detailed Annotation

Triple sheared related

Broad Annotation

Triple sheared

Motif group

IL_80231.1

Basepair signature

cWW-L-R-L-R-L-R-tHS-cWW

Number of instances in this motif group

2

Unit IDs

9GUX|1|A|A|1430
9GUX|1|A|A|1431
9GUX|1|A|G|1432
9GUX|1|A|A|1433
9GUX|1|A|A|1434
9GUX|1|A|G|1435
*
9GUX|1|A|C|1466
9GUX|1|A|C|1467
9GUX|1|A|A|1468
9GUX|1|A|C|1469
9GUX|1|A|U|1470

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain B

30S ribosomal protein S1