IL_9H3G_010
3D structure
- PDB id
- 9H3G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.82 Å
Loop
- Sequence
- CUUAGUAAC*GCGAACCG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- 9x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_93502.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
9H3G|1|A|C|80
9H3G|1|A|U|81
9H3G|1|A|U|82
9H3G|1|A|A|83
9H3G|1|A|G|84
9H3G|1|A|U|85
9H3G|1|A|A|86
9H3G|1|A|A|87
9H3G|1|A|C|88
*
9H3G|1|A|G|94
9H3G|1|A|C|95
9H3G|1|A|G|96
9H3G|1|A|A|97
9H3G|1|A|A|98
9H3G|1|A|C|99
9H3G|1|A|C|100
9H3G|1|A|G|101
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain AG
- Large ribosomal subunit protein eL13z
- Chain AJ
- Large ribosomal subunit protein eL18x
- Chain BD
- Large ribosomal subunit protein eL42z/eL42y
- Chain Ea
- Large ribosomal subunit protein eL15z
- Chain Ha
- Large ribosomal subunit protein uL15x
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