IL_9H3G_055

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

UGCCCAAC*GA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|A|U|1182
9H3G|1|A|G|1183
9H3G|1|A|C|1184
9H3G|1|A|C|1185
9H3G|1|A|C|1186
9H3G|1|A|A|1187
9H3G|1|A|A|1188
9H3G|1|A|C|1189
*
9H3G|1|A|G|1335
9H3G|1|A|A|1336

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AL

Ribosomal protein L18ae/LX family protein

Chain AW

Large ribosomal subunit protein eL33y

Chain BH

Large ribosomal subunit protein uL13y

Chain BR

Ribosomal protein L30/L7 family protein