IL_9H3G_138

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

CUAAGUC*GCCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89862.2

Basepair signature

cWW-L-tHS-L-R-L-cWW-L

Number of instances in this motif group

7

Unit IDs

9H3G|1|A|C|3213
9H3G|1|A|U|3214
9H3G|1|A|A|3215
9H3G|1|A|A|3216
9H3G|1|A|G|3217
9H3G|1|A|U|3218
9H3G|1|A|C|3219
*
9H3G|1|A|G|3244
9H3G|1|A|C|3245
9H3G|1|A|C|3246
9H3G|1|A|G|3247

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain AH

Large ribosomal subunit protein eL14y

Chain AW

Large ribosomal subunit protein eL33y