IL_9H3G_166

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

CCGU*AG(A2M)G

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37443.1

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

11

Unit IDs

9H3G|1|h1|C|147
9H3G|1|h1|C|148
9H3G|1|h1|G|149
9H3G|1|h1|U|150
*
9H3G|1|h1|A|160
9H3G|1|h1|G|161
9H3G|1|h1|A2M|162
9H3G|1|h1|G|163

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain Ka

Small ribosomal subunit protein eS24y

Chain Ta

Small ribosomal subunit protein eS6y