IL_9H3G_216

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

GUAAGGA(OMU)UG*CUUGAUUC

Length

18 nucleotides

Bulged bases

9H3G|1|h1|G|1229

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|h1|G|1225
9H3G|1|h1|U|1226
9H3G|1|h1|A|1227
9H3G|1|h1|A|1228
9H3G|1|h1|G|1229
9H3G|1|h1|G|1230
9H3G|1|h1|A|1231
9H3G|1|h1|OMU|1232
9H3G|1|h1|U|1233
9H3G|1|h1|G|1234
*
9H3G|1|h1|C|1253
9H3G|1|h1|U|1254
9H3G|1|h1|U|1255
9H3G|1|h1|G|1256
9H3G|1|h1|A|1257
9H3G|1|h1|U|1258
9H3G|1|h1|U|1259
9H3G|1|h1|C|1260

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain AI

Small ribosomal subunit protein eS10z

Chain Ca

Small ribosomal subunit protein uS14z/uS14y/uS14x