IL_9H3K_044

3D structure

PDB id

9H3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor d126_(L29)-/(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

6.62 Å

Loop

Sequence

UGC*GCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3K_044 not in the Motif Atlas

Geometric match to IL_2ZI0_001

Geometric discrepancy: 0.3648

The information below is about IL_2ZI0_001

Detailed Annotation

Isolated near basepair

Broad Annotation

Isolated near basepair

Motif group

IL_42997.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

23

Unit IDs

9H3K|1|A|U|2743
9H3K|1|A|G|2744
9H3K|1|A|C|2745
*
9H3K|1|A|G|2759
9H3K|1|A|C|2760
9H3K|1|A|A|2761

Current chains

Chain A

23S ribosomal RNA

Nearby chains