IL_9H3O_046

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

9H3O|1|A|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3O_046 not in the Motif Atlas

Homologous match to IL_9DFE_056

Geometric discrepancy: 0.2338

The information below is about IL_9DFE_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

9H3O|1|A|C|1437
9H3O|1|A|U|1438
9H3O|1|A|A|1439
9H3O|1|A|U|1440
*
9H3O|1|A|A|1551
9H3O|1|A|A|1552
9H3O|1|A|A|1553
9H3O|1|A|U|1554
9H3O|1|A|G|1555

Current chains

Chain A

23S ribosomal RNA

Nearby chains