IL_9H3O_062

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

AUA*UGUUU

Length

8 nucleotides

Bulged bases

9H3O|1|A|U|2491

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3O_062 not in the Motif Atlas

Homologous match to IL_9DFE_094

Geometric discrepancy: 0.274

The information below is about IL_9DFE_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.2

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

24

Unit IDs

9H3O|1|A|A|2459
9H3O|1|A|U|2460
9H3O|1|A|A|2461
*
9H3O|1|A|U|2489
9H3O|1|A|G|2490
9H3O|1|A|U|2491
9H3O|1|A|U|2492
9H3O|1|A|U|2493

Current chains

Chain A

23S ribosomal RNA

Nearby chains