IL_9H3P_036

3D structure

PDB id

9H3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

7.06 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

9H3P|1|A|G|1332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3P_036 not in the Motif Atlas

Homologous match to IL_4WF9_050

Geometric discrepancy: 0.3645

The information below is about IL_4WF9_050

Detailed Annotation

Major groove minor groove platform with tHH

Broad Annotation

No text annotation

Motif group

IL_83150.2

Basepair signature

cWW-tHH-cWW-L-L

Number of instances in this motif group

4

Unit IDs

9H3P|1|A|C|1319
9H3P|1|A|C|1320
9H3P|1|A|A|1321
9H3P|1|A|A|1322
9H3P|1|A|C|1323
*
9H3P|1|A|G|1331
9H3P|1|A|G|1332
9H3P|1|A|G|1333

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain T

Large ribosomal subunit protein uL23