IL_9H3P_056

3D structure

PDB id

9H3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

7.06 Å

Loop

Sequence

AA*UACU

Length

6 nucleotides

Bulged bases

9H3P|1|A|A|2439, 9H3P|1|A|C|2440

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3P_056 not in the Motif Atlas

Geometric match to IL_1R3E_001

Geometric discrepancy: 0.2094

The information below is about IL_1R3E_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_05670.1

Basepair signature

cWW-cWW

Number of instances in this motif group

9

Unit IDs

9H3P|1|A|A|2070
9H3P|1|A|A|2071
*
9H3P|1|A|U|2438
9H3P|1|A|A|2439
9H3P|1|A|C|2440
9H3P|1|A|U|2441

Current chains

Chain A

23S ribosomal RNA

Nearby chains