IL_9H51_025
3D structure
- PDB id
- 9H51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit in complex with PUS1, METTL15 and RBFA(IN conformation) (state M1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AAACU*ACUAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9H51_025 not in the Motif Atlas
- Geometric match to IL_9H3G_204
- Geometric discrepancy: 0.195
- The information below is about IL_9H3G_204
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.3
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9H51|1|A|A|1067
9H51|1|A|A|1068
9H51|1|A|A|1069
9H51|1|A|C|1070
9H51|1|A|U|1071
*
9H51|1|A|A|1087
9H51|1|A|C|1088
9H51|1|A|U|1089
9H51|1|A|A|1090
9H51|1|A|U|1091
Current chains
- Chain A
- RNA (969-MER)
Nearby chains
- Chain I
- 28S ribosomal protein S11, mitochondrial
- Chain Q
- Small ribosomal subunit protein bS21m
- Chain c
- Pseudouridylate synthase 1 homolog
Coloring options: