IL_9H52_004

3D structure

PDB id

9H52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UAC*GA

Length

5 nucleotides

Bulged bases

9H52|1|A|A|691

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H52_004 not in the Motif Atlas

Geometric match to IL_9PN5_109

Geometric discrepancy: 0.2276

The information below is about IL_9PN5_109

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

175

Unit IDs

9H52|1|A|U|690
9H52|1|A|A|691
9H52|1|A|C|692
*
9H52|1|A|G|822
9H52|1|A|A|823

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 9

Nitric oxide-associated protein 1