IL_9H52_030

3D structure

PDB id

9H52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AUC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H52_030 not in the Motif Atlas

Homologous match to IL_6CZR_157

Geometric discrepancy: 0.3709

The information below is about IL_6CZR_157

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_08069.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

9H52|1|A|A|1266
9H52|1|A|U|1267
9H52|1|A|C|1268
*
9H52|1|A|G|1323
9H52|1|A|U|1324
9H52|1|A|U|1325

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 7

Isoform 2 of Ribosome assembly protein METTL17, mitochondrial