IL_9H74_088
3D structure
- PDB id
- 9H74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9H74_088 not in the Motif Atlas
- Homologous match to IL_9H3G_235
- Geometric discrepancy: 0.1482
- The information below is about IL_9H3G_235
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.7
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 240
Unit IDs
9H74|1|2|G|1701
9H74|1|2|U|1702
9H74|1|2|C|1703
*
9H74|1|2|G|1820
9H74|1|2|U|1821
9H74|1|2|C|1822
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain R
- 40S ribosomal protein uS19
- Chain j
- Eukaryotic translation initiation factor 1A, X-chromosomal
- Chain l
- 60S ribosomal protein L41
- Chain o
- Eukaryotic translation initiation factor 5
Coloring options: