IL_9HA2_056
3D structure
- PDB id
- 9HA2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Alternative PET exit Api137
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.17 Å
Loop
- Sequence
- UCACU*AAA
- Length
- 8 nucleotides
- Bulged bases
- 9HA2|1|A|A|2726
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HA2_056 not in the Motif Atlas
- Homologous match to IL_5J7L_347
- Geometric discrepancy: 0.2215
- The information below is about IL_5J7L_347
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
9HA2|1|A|U|2680
9HA2|1|A|C|2681
9HA2|1|A|A|2682
9HA2|1|A|C|2683
9HA2|1|A|U|2684
*
9HA2|1|A|A|2725
9HA2|1|A|A|2726
9HA2|1|A|A|2727
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- Large ribosomal subunit protein uL14
- Chain N
- Large ribosomal subunit protein bL17
- Chain P
- Large ribosomal subunit protein bL19
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