IL_9HA4_047

3D structure

PDB id

9HA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.26 Å

Loop

Sequence

UUU*AAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HA4_047 not in the Motif Atlas

Geometric match to IL_7VFT_002

Geometric discrepancy: 0.237

The information below is about IL_7VFT_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

9HA4|1|A|U|1485
9HA4|1|A|U|1486
9HA4|1|A|U|1487
*
9HA4|1|A|A|1502
9HA4|1|A|A|1503
9HA4|1|A|A|1504

Current chains

Chain A

23S ribosomal RNA

Nearby chains