IL_9HA6_038
3D structure
- PDB id
- 9HA6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mature 50S subunit supplemented with Api137
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 9HA6|1|A|U|1033
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HA6_038 not in the Motif Atlas
- Homologous match to IL_4WF9_041
- Geometric discrepancy: 0.1988
- The information below is about IL_4WF9_041
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
9HA6|1|A|G|1031
9HA6|1|A|A|1032
9HA6|1|A|U|1033
9HA6|1|A|G|1034
*
9HA6|1|A|C|1121
9HA6|1|A|G|1122
9HA6|1|A|C|1123
Current chains
- Chain A
- 23S ribosomal rRNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL36A
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
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