IL_9HA6_111
3D structure
- PDB id
- 9HA6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mature 50S subunit supplemented with Api137
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- GGUCCC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HA6_111 not in the Motif Atlas
- Homologous match to IL_9DFE_111
- Geometric discrepancy: 0.2114
- The information below is about IL_9DFE_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18472.4
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
9HA6|1|B|G|23
9HA6|1|B|G|24
9HA6|1|B|U|25
9HA6|1|B|C|26
9HA6|1|B|C|27
9HA6|1|B|C|28
*
9HA6|1|B|G|56
9HA6|1|B|A|57
9HA6|1|B|A|58
9HA6|1|B|A|59
9HA6|1|B|C|60
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain F
- Large ribosomal subunit protein uL5
- Chain O
- Large ribosomal subunit protein uL18
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