IL_9HAM_050
3D structure
- PDB id
- 9HAM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C_(L29)-/(L22)- precursor supplemented with Api137
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.06 Å
Loop
- Sequence
- ACUAGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9HAM|1|A|U|1991, 9HAM|1|A|G|1992
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HAM_050 not in the Motif Atlas
- Homologous match to IL_4WF9_065
- Geometric discrepancy: 0.4772
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
9HAM|1|A|A|1669
9HAM|1|A|C|1670
9HAM|1|A|U|1671
9HAM|1|A|A|1672
9HAM|1|A|G|1673
9HAM|1|A|G|1674
*
9HAM|1|A|C|1990
9HAM|1|A|U|1991
9HAM|1|A|G|1992
9HAM|1|A|U|1993
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain K
- Large ribosomal subunit protein uL14
Coloring options: