IL_9HLZ_090
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AAUC*GU
- Length
- 6 nucleotides
- Bulged bases
- 9HLZ|1|AA|A|3124, 9HLZ|1|AA|U|3125
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HLZ_090 not in the Motif Atlas
- Geometric match to IL_8P9A_363
- Geometric discrepancy: 0.227
- The information below is about IL_8P9A_363
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
9HLZ|1|AA|A|3123
9HLZ|1|AA|A|3124
9HLZ|1|AA|U|3125
9HLZ|1|AA|C|3126
*
9HLZ|1|AA|G|3259
9HLZ|1|AA|U|3260
Current chains
- Chain AA
- 21S mitochondrial rRNA
Nearby chains
- Chain CC
- Large ribosomal subunit protein uL3m
- Chain LL
- Large ribosomal subunit protein bL17m
- Chain MM
- Large ribosomal subunit protein bL19m
- Chain aa
- Large ribosomal subunit protein mL58
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