IL_9HLZ_097
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAUGAC*GAG
- Length
- 9 nucleotides
- Bulged bases
- 9HLZ|1|r|A|55, 9HLZ|1|r|A|58
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HLZ_097 not in the Motif Atlas
- Geometric match to IL_8B0X_003
- Geometric discrepancy: 0.1222
- The information below is about IL_8B0X_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32983.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
9HLZ|1|r|C|54
9HLZ|1|r|A|55
9HLZ|1|r|U|56
9HLZ|1|r|G|57
9HLZ|1|r|A|58
9HLZ|1|r|C|59
*
9HLZ|1|r|G|363
9HLZ|1|r|A|364
9HLZ|1|r|G|365
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain II
- Large ribosomal subunit protein uL14m
- Chain L
- Small ribosomal subunit protein uS12m
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