IL_9HLZ_147
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUAUU*AUCA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HLZ_147 not in the Motif Atlas
- Homologous match to IL_6CZR_170
- Geometric discrepancy: 0.4007
- The information below is about IL_6CZR_170
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_77691.4
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
9HLZ|1|r|U|1499
9HLZ|1|r|U|1500
9HLZ|1|r|A|1501
9HLZ|1|r|U|1502
9HLZ|1|r|U|1503
*
9HLZ|1|r|A|1559
9HLZ|1|r|U|1560
9HLZ|1|r|C|1561
9HLZ|1|r|A|1562
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain MM
- Large ribosomal subunit protein bL19m
- Chain O
- Small ribosomal subunit protein uS15m
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