IL_9HM0_120
3D structure
- PDB id
- 9HM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUUAAAG*CA
- Length
- 9 nucleotides
- Bulged bases
- 9HM0|1|r|A|681
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HM0_120 not in the Motif Atlas
- Homologous match to IL_6CZR_134
- Geometric discrepancy: 0.2306
- The information below is about IL_6CZR_134
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.5
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
9HM0|1|r|U|678
9HM0|1|r|U|679
9HM0|1|r|U|680
9HM0|1|r|A|681
9HM0|1|r|A|682
9HM0|1|r|A|683
9HM0|1|r|G|684
*
9HM0|1|r|C|945
9HM0|1|r|A|946
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain 1
- Small ribosomal subunit protein mS38
- Chain E
- Small ribosomal subunit protein uS5m
- Chain L
- Small ribosomal subunit protein uS12m
- Chain Q
- Small ribosomal subunit protein uS17m
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