IL_9HUS_014

3D structure

PDB id

9HUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HUS_014 not in the Motif Atlas

Geometric match to IL_4WF9_014

Geometric discrepancy: 0.1659

The information below is about IL_4WF9_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76658.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

4

Unit IDs

9HUS|1|b|U|293
9HUS|1|b|A|294
9HUS|1|b|G|295
*
9HUS|1|b|C|343
9HUS|1|b|A|344
9HUS|1|b|A|345
9HUS|1|b|A|346
9HUS|1|b|A|347

Current chains

Chain b

23S rRNA

Nearby chains

Chain u

Large ribosomal subunit protein uL24