IL_9I14_036

3D structure

PDB id

9I14 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES IN HYBRID-PRE STATE

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9I14|1|L5|G|748, 9I14|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I14|1|L5|G|745
9I14|1|L5|A|746
9I14|1|L5|A|747
9I14|1|L5|G|748
9I14|1|L5|G|749
9I14|1|L5|U|750
9I14|1|L5|G|751
9I14|1|L5|G|752
*
9I14|1|L5|U|911
9I14|1|L5|G|912
9I14|1|L5|U|913
9I14|1|L5|U|914
9I14|1|L5|A|915
9I14|1|L5|C|916
9I14|1|L5|A|917
9I14|1|L5|G|918
9I14|1|L5|C|919

Current chains

Chain L5

LSU 28S rRNA

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a