IL_9I3L_039
3D structure
- PDB id
- 9I3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCCCAAAG*CA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I3L_039 not in the Motif Atlas
- Homologous match to IL_7A0S_034
- Geometric discrepancy: 0.1614
- The information below is about IL_7A0S_034
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_46868.1
- Basepair signature
- cWW-L-cWW-L-L-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
9I3L|1|b|U|1006
9I3L|1|b|C|1007
9I3L|1|b|C|1008
9I3L|1|b|C|1009
9I3L|1|b|A|1010
9I3L|1|b|A|1011
9I3L|1|b|A|1012
9I3L|1|b|G|1013
*
9I3L|1|b|C|1152
9I3L|1|b|A|1153
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain j
- Large ribosomal subunit protein uL13
- Chain q
- Large ribosomal subunit protein bL20
Coloring options: