IL_9I3L_094

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9I3L_094 not in the Motif Atlas

Homologous match to IL_7A0S_081

Geometric discrepancy: 0.1385

The information below is about IL_7A0S_081

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

9I3L|1|b|C|2354
9I3L|1|b|G|2355
9I3L|1|b|A|2356
9I3L|1|b|G|2357
*
9I3L|1|b|C|2368
9I3L|1|b|G|2369
9I3L|1|b|A|2370
9I3L|1|b|G|2371

Current chains

Chain b

23S rRNA

Nearby chains

Chain 7

Large ribosomal subunit protein bL35

Chain o

Large ribosomal subunit protein uL18

Chain y

Large ribosomal subunit protein bL27