IL_9I3L_105
3D structure
- PDB id
- 9I3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGAG*CGAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 9I3L|1|b|G|2784
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I3L_105 not in the Motif Atlas
- Homologous match to IL_7A0S_093
- Geometric discrepancy: 0.114
- The information below is about IL_7A0S_093
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9I3L|1|b|C|2640
9I3L|1|b|U|2641
9I3L|1|b|G|2642
9I3L|1|b|A|2643
9I3L|1|b|G|2644
*
9I3L|1|b|C|2778
9I3L|1|b|G|2779
9I3L|1|b|A|2780
9I3L|1|b|G|2781
9I3L|1|b|A|2782
9I3L|1|b|U|2783
9I3L|1|b|G|2784
9I3L|1|b|A|2785
9I3L|1|b|G|2786
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain j
- Large ribosomal subunit protein uL13
Coloring options: