IL_9I89_164
3D structure
- PDB id
- 9I89 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- UACAAAG*CAUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 9I89|1|a|U|1297
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9I89_164 not in the Motif Atlas
- Homologous match to IL_6CZR_160
- Geometric discrepancy: 0.2916
- The information below is about IL_6CZR_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.1
- Basepair signature
- cWW-tWH-tWH-L-R-L-R-tWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9I89|1|a|U|1258
9I89|1|a|A|1259
9I89|1|a|C|1260
9I89|1|a|A|1261
9I89|1|a|A|1262
9I89|1|a|A|1263
9I89|1|a|G|1264
*
9I89|1|a|C|1295
9I89|1|a|A|1296
9I89|1|a|U|1297
9I89|1|a|A|1298
9I89|1|a|A|1299
9I89|1|a|A|1300
9I89|1|a|G|1301
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain h
- Small ribosomal subunit protein uS7
- Chain j
- Small ribosomal subunit protein uS9
- Chain k
- Small ribosomal subunit protein uS10
- Chain o
- Small ribosomal subunit protein uS14B
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