IL_9J1M_155

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CGU*AGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9J1M_155 not in the Motif Atlas

Geometric match to IL_5F5F_003

Geometric discrepancy: 0.242

The information below is about IL_5F5F_003

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

9J1M|1|a|C|1001
9J1M|1|a|G|1002
9J1M|1|a|U|1003
*
9J1M|1|a|A|1012
9J1M|1|a|G|1013
9J1M|1|a|G|1014

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

Small ribosomal subunit protein uS14B