IL_9JNS_004
3D structure
- PDB id
- 9JNS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S precursor - Erm complex (C-II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 9JNS|1|A|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9JNS_004 not in the Motif Atlas
- Homologous match to IL_7A0S_004
- Geometric discrepancy: 0.4658
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9JNS|1|A|G|81
9JNS|1|A|U|82
9JNS|1|A|A|83
9JNS|1|A|A|84
9JNS|1|A|G|85
*
9JNS|1|A|C|97
9JNS|1|A|G|98
9JNS|1|A|U|99
9JNS|1|A|U|100
9JNS|1|A|A|101
9JNS|1|A|U|102
9JNS|1|A|A|103
9JNS|1|A|A|104
9JNS|1|A|C|105
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain U
- 50S ribosomal protein L24
- Chain Y
- 50S ribosomal protein L29
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