IL_9K0Z_034
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGUAG*CGCAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 9K0Z|1|A|A|682
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_034 not in the Motif Atlas
- Geometric match to IL_5J7L_035
- Geometric discrepancy: 0.3057
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9K0Z|1|A|U|664
9K0Z|1|A|G|665
9K0Z|1|A|U|666
9K0Z|1|A|A|667
9K0Z|1|A|G|668
*
9K0Z|1|A|C|679
9K0Z|1|A|G|680
9K0Z|1|A|C|681
9K0Z|1|A|A|682
9K0Z|1|A|G|683
9K0Z|1|A|A|684
9K0Z|1|A|U|685
9K0Z|1|A|A|686
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
- Chain h
- Large subunit ribosomal RNA; LSU rRNA
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