IL_9K0Z_054
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GCUG*CGAAUC
- Length
- 10 nucleotides
- Bulged bases
- 9K0Z|1|A|U|1238, 9K0Z|1|A|A|1261, 9K0Z|1|A|U|1262
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9K0Z_054 not in the Motif Atlas
- Geometric match to IL_5J7L_055
- Geometric discrepancy: 0.1954
- The information below is about IL_5J7L_055
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9K0Z|1|A|G|1236
9K0Z|1|A|C|1237
9K0Z|1|A|U|1238
9K0Z|1|A|G|1239
*
9K0Z|1|A|C|1258
9K0Z|1|A|G|1259
9K0Z|1|A|A|1260
9K0Z|1|A|A|1261
9K0Z|1|A|U|1262
9K0Z|1|A|C|1263
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14B
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