IL_9K9J_010

3D structure

PDB id

9K9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of linear intron of Anabaena tRNA(Leu) precursor

Experimental method

ELECTRON MICROSCOPY

Resolution

3.46 Å

Loop

Sequence

CUAAC*GAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9K9J_010 not in the Motif Atlas

Geometric match to IL_2OEU_001

Geometric discrepancy: 0.3438

The information below is about IL_2OEU_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24466.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

9

Unit IDs

9K9J|1|A|C|208
9K9J|1|A|U|209
9K9J|1|A|A|210
9K9J|1|A|A|211
9K9J|1|A|C|212
*
9K9J|1|A|G|221
9K9J|1|A|A|222
9K9J|1|A|G|223

Current chains

Chain A

RNA (251-MER)

Nearby chains