IL_9M0P_211
3D structure
- PDB id
- 9M0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of human 80S ribosome in complex with montanine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CCUG*CGCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9M0P_211 not in the Motif Atlas
- Geometric match to IL_5EW4_002
- Geometric discrepancy: 0.2834
- The information below is about IL_5EW4_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 43
Unit IDs
9M0P|1|S2|C|1230
9M0P|1|S2|C|1231
9M0P|1|S2|U|1232
9M0P|1|S2|G|1233
*
9M0P|1|S2|C|1525
9M0P|1|S2|G|1526
9M0P|1|S2|C|1527
9M0P|1|S2|G|1528
Current chains
- Chain S2
- 18S ribosomal RNA|HOMO SAPIENS
Nearby chains
- Chain S6
- Transfer RNA; tRNA
- Chain SQ
- 40S ribosomal protein S16
- Chain ST
- 40S ribosomal protein S19
- Chain SU
- 40S ribosomal protein S20
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