IL_9MNC_037

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9MNC|1|L5|G|748, 9MNC|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|G|745
9MNC|1|L5|A|746
9MNC|1|L5|A|747
9MNC|1|L5|G|748
9MNC|1|L5|G|749
9MNC|1|L5|U|750
9MNC|1|L5|G|751
9MNC|1|L5|G|752
*
9MNC|1|L5|U|911
9MNC|1|L5|G|912
9MNC|1|L5|U|913
9MNC|1|L5|U|914
9MNC|1|L5|A|915
9MNC|1|L5|C|916
9MNC|1|L5|A|917
9MNC|1|L5|G|918
9MNC|1|L5|C|919

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

Large ribosomal subunit protein eL14

Chain LS

Large ribosomal subunit protein eL20