IL_9MNC_199
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- AG(OMG)GCAAG*CU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MNC_199 not in the Motif Atlas
- Homologous match to IL_9PN5_171
- Geometric discrepancy: 0.0641
- The information below is about IL_9PN5_171
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 14
Unit IDs
9MNC|1|S2|A|599
9MNC|1|S2|G|600
9MNC|1|S2|OMG|601
9MNC|1|S2|G|602
9MNC|1|S2|C|603
9MNC|1|S2|A|604
9MNC|1|S2|A|605
9MNC|1|S2|G|606
*
9MNC|1|S2|C|636
9MNC|1|S2|U|637
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SC
- Small ribosomal subunit protein uS5
- Chain SJ
- Small ribosomal subunit protein uS4
- Chain Se
- FAU ubiquitin-like and ribosomal protein S30
Coloring options: