IL_9MQS_003

3D structure

PDB id

9MQS (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM Structure of the Candida albicans Group I Intron-GMP Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAGU*AAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MQS_003 not in the Motif Atlas

Geometric match to IL_1U6B_004

Geometric discrepancy: 0.2419

The information below is about IL_1U6B_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20358.1

Basepair signature

cWW-L-R-L-cWW-cWW

Number of instances in this motif group

2

Unit IDs

9MQS|1|A|G|100
9MQS|1|A|A|101
9MQS|1|A|A|102
9MQS|1|A|G|103
9MQS|1|A|U|104
*
9MQS|1|A|A|143
9MQS|1|A|A|144
9MQS|1|A|A|145
9MQS|1|A|C|146

Current chains

Chain A

RNA (332-MER)

Nearby chains