9MQS Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9MQS_002 | 1/A/163:183 | No text annotation | ||
| HL_9MQS_003 | 1/A/188:191 | No text annotation | ||
| HL_9MQS_005 | 1/A/290:296 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9MQS_001 | No text annotation | ||
| HL_9MQS_004 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9MQS_003 | 1/A/100:104, 1/A/143:146 | No text annotation | geometric IL_1U6B_004 IL_20358.1 | |
| IL_9MQS_004 | 1/A/204:206, 1/A/242:244 | Isolated non-canonical cWW pair | geometric IL_3BNN_008 IL_71625.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9MQS_001 | Isolated non-canonical cWW pair | ||
| IL_9MQS_002 | Isolated cWH basepair |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9MQS_001 | 1/A/261:264, 1/A/279:283, 1/A/303:314 | No text annotation | ||
| J4_9MQS_001 | 1/A/157:159, 1/A/187:188, 1/A/191:201, 1/A/247:255 | No text annotation |
Problematic loops
No problematic loops
Coloring options: